Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxd8P23463 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxd8P23463 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxd8P23463 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hoxd8P23463 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Hoxd8P23463 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxd8P23463 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxd8P23463 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxd8P23463 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hoxd8P23463 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxd8P23463 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxd8P23463 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxd8P23463 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hoxd8P23463 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxd8P23463 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.66■□□□□ 0.74
Hoxd8P23463 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxd8P23463 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxd8P23463 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.65■□□□□ 0.74
Hoxd8P23463 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.65■□□□□ 0.74
Hoxd8P23463 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxd8P23463 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hoxd8P23463 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxd8P23463 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxd8P23463 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxd8P23463 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxd8P23463 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.64■□□□□ 0.73
Hoxd8P23463 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxd8P23463 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Hoxd8P23463 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.64■□□□□ 0.73
Hoxd8P23463 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxd8P23463 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxd8P23463 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxd8P23463 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxd8P23463 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxd8P23463 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxd8P23463 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.63■□□□□ 0.73
Hoxd8P23463 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxd8P23463 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Gm11249-201ENSMUST00000117071 859 ntBASIC19.63■□□□□ 0.73
Hoxd8P23463 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.63■□□□□ 0.73
Hoxd8P23463 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.63■□□□□ 0.73
Hoxd8P23463 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxd8P23463 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxd8P23463 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.62■□□□□ 0.73
Hoxd8P23463 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Hoxd8P23463 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hoxd8P23463 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxd8P23463 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxd8P23463 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxd8P23463 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.61■□□□□ 0.73
Hoxd8P23463 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxd8P23463 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hoxd8P23463 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxd8P23463 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxd8P23463 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxd8P23463 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxd8P23463 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxd8P23463 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.6■□□□□ 0.73
Hoxd8P23463 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxd8P23463 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.6■□□□□ 0.73
Hoxd8P23463 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxd8P23463 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxd8P23463 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Hoxd8P23463 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hoxd8P23463 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxd8P23463 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxd8P23463 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxd8P23463 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxd8P23463 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxd8P23463 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxd8P23463 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxd8P23463 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxd8P23463 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxd8P23463 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxd8P23463 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxd8P23463 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxd8P23463 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms