Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Gm13534-201ENSMUST00000121169 513 ntBASIC16.4■□□□□ 0.22
PtcraP0C6B2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PtcraP0C6B2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PtcraP0C6B2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PtcraP0C6B2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.38■□□□□ 0.21
PtcraP0C6B2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Gm42778-201ENSMUST00000199644 553 ntBASIC16.38■□□□□ 0.21
PtcraP0C6B2 BC021767-201ENSMUST00000126387 1716 ntBASIC16.38■□□□□ 0.21
PtcraP0C6B2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PtcraP0C6B2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Gm18284-201ENSMUST00000172604 624 ntBASIC16.37■□□□□ 0.21
PtcraP0C6B2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.37■□□□□ 0.21
PtcraP0C6B2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PtcraP0C6B2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Gm5874-201ENSMUST00000096101 508 ntBASIC16.36■□□□□ 0.21
PtcraP0C6B2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.36■□□□□ 0.21
PtcraP0C6B2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PtcraP0C6B2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
PtcraP0C6B2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PtcraP0C6B2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms