Protein–RNA interactions for Protein: P09411

Pgk1, Phosphoglycerate kinase 1, mousemouse

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pgk1P09411 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pgk1P09411 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pgk1P09411 Gm27275-201ENSMUST00000184318 272 ntBASIC20.27■□□□□ 0.84
Pgk1P09411 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Pgk1P09411 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pgk1P09411 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pgk1P09411 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pgk1P09411 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pgk1P09411 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pgk1P09411 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pgk1P09411 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pgk1P09411 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pgk1P09411 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pgk1P09411 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pgk1P09411 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pgk1P09411 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pgk1P09411 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pgk1P09411 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.26■□□□□ 0.83
Pgk1P09411 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pgk1P09411 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pgk1P09411 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.25■□□□□ 0.83
Pgk1P09411 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pgk1P09411 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pgk1P09411 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.25■□□□□ 0.83
Pgk1P09411 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pgk1P09411 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.25■□□□□ 0.83
Pgk1P09411 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pgk1P09411 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pgk1P09411 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pgk1P09411 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pgk1P09411 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.25■□□□□ 0.83
Pgk1P09411 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pgk1P09411 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pgk1P09411 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pgk1P09411 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pgk1P09411 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Pgk1P09411 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.24■□□□□ 0.83
Pgk1P09411 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pgk1P09411 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
Pgk1P09411 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pgk1P09411 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Gm22325-201ENSMUST00000158904 308 ntBASIC20.23■□□□□ 0.83
Pgk1P09411 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pgk1P09411 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.23■□□□□ 0.83
Pgk1P09411 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pgk1P09411 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Pgk1P09411 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pgk1P09411 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Pgk1P09411 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pgk1P09411 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pgk1P09411 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.22■□□□□ 0.83
Pgk1P09411 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.22■□□□□ 0.83
Pgk1P09411 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pgk1P09411 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Pgk1P09411 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Pgk1P09411 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Gm12896-201ENSMUST00000118430 226 ntBASIC20.21■□□□□ 0.83
Pgk1P09411 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.21■□□□□ 0.83
Pgk1P09411 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.21■□□□□ 0.83
Pgk1P09411 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pgk1P09411 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Pgk1P09411 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pgk1P09411 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.2■□□□□ 0.82
Pgk1P09411 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.2■□□□□ 0.82
Pgk1P09411 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.2■□□□□ 0.82
Pgk1P09411 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pgk1P09411 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pgk1P09411 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pgk1P09411 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pgk1P09411 Iqck-206ENSMUST00000208658 2891 ntBASIC20.2■□□□□ 0.82
Pgk1P09411 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.19■□□□□ 0.82
Pgk1P09411 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pgk1P09411 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms