Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Col4a2P08122 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a2P08122 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.79■□□□□ 0.44
Col4a2P08122 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.79■□□□□ 0.44
Col4a2P08122 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.79■□□□□ 0.44
Col4a2P08122 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Col4a2P08122 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.79■□□□□ 0.44
Col4a2P08122 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Col4a2P08122 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a2P08122 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.78■□□□□ 0.44
Col4a2P08122 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a2P08122 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.78■□□□□ 0.44
Col4a2P08122 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a2P08122 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.78■□□□□ 0.44
Col4a2P08122 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a2P08122 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a2P08122 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a2P08122 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Col4a2P08122 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Col4a2P08122 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a2P08122 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a2P08122 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a2P08122 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a2P08122 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.77■□□□□ 0.44
Col4a2P08122 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a2P08122 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a2P08122 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a2P08122 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col4a2P08122 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Col4a2P08122 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.76■□□□□ 0.43
Col4a2P08122 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a2P08122 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col4a2P08122 Gm6576-201ENSMUST00000169678 883 ntBASIC17.75■□□□□ 0.43
Col4a2P08122 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.75■□□□□ 0.43
Col4a2P08122 Gm10698-201ENSMUST00000182663 604 ntBASIC17.75■□□□□ 0.43
Col4a2P08122 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.75■□□□□ 0.43
Col4a2P08122 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.75■□□□□ 0.43
Col4a2P08122 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.75■□□□□ 0.43
Col4a2P08122 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a2P08122 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a2P08122 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a2P08122 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a2P08122 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a2P08122 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a2P08122 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a2P08122 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a2P08122 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Col4a2P08122 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a2P08122 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a2P08122 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a2P08122 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Col4a2P08122 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a2P08122 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a2P08122 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a2P08122 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a2P08122 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a2P08122 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a2P08122 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a2P08122 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Col4a2P08122 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a2P08122 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a2P08122 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a2P08122 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a2P08122 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a2P08122 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a2P08122 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a2P08122 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.72■□□□□ 0.43
Col4a2P08122 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a2P08122 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col4a2P08122 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.72■□□□□ 0.43
Col4a2P08122 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a2P08122 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Col4a2P08122 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a2P08122 Golph3-202ENSMUST00000226517 2359 ntBASIC17.72■□□□□ 0.43
Col4a2P08122 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a2P08122 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
Col4a2P08122 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.72■□□□□ 0.43
Col4a2P08122 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Col4a2P08122 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms