Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.8■□□□□ 0.12
Ercc1P07903 Rps24-207ENSMUST00000224568 714 ntBASIC15.8■□□□□ 0.12
Ercc1P07903 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc1P07903 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.8■□□□□ 0.12
Ercc1P07903 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc1P07903 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ercc1P07903 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ercc1P07903 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.79■□□□□ 0.12
Ercc1P07903 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ercc1P07903 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ercc1P07903 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ercc1P07903 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.79■□□□□ 0.12
Ercc1P07903 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.79■□□□□ 0.12
Ercc1P07903 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.79■□□□□ 0.12
Ercc1P07903 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ercc1P07903 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ercc1P07903 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ercc1P07903 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ercc1P07903 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.78■□□□□ 0.12
Ercc1P07903 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.78■□□□□ 0.12
Ercc1P07903 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.78■□□□□ 0.12
Ercc1P07903 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ercc1P07903 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ercc1P07903 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ercc1P07903 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.77■□□□□ 0.12
Ercc1P07903 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ercc1P07903 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.77■□□□□ 0.12
Ercc1P07903 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ercc1P07903 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ercc1P07903 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.77■□□□□ 0.12
Ercc1P07903 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.77■□□□□ 0.12
Ercc1P07903 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ercc1P07903 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Ercc1P07903 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.77■□□□□ 0.11
Ercc1P07903 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ercc1P07903 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Ercc1P07903 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ercc1P07903 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ercc1P07903 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ercc1P07903 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Ercc1P07903 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.76■□□□□ 0.11
Ercc1P07903 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.76■□□□□ 0.11
Ercc1P07903 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.76■□□□□ 0.11
Ercc1P07903 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.76■□□□□ 0.11
Ercc1P07903 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Ercc1P07903 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ercc1P07903 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Ercc1P07903 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ercc1P07903 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.76■□□□□ 0.11
Ercc1P07903 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms