Protein–RNA interactions for Protein: P04942

Ig kappa chain V-VI region NQ5-61.1.2, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04942 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04942 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04942 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.23■□□□□ 0.03
P04942 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04942 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04942 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04942 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
P04942 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
P04942 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
P04942 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.22■□□□□ 0.03
P04942 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04942 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.21■□□□□ 0.03
P04942 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04942 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04942 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04942 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
P04942 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.2■□□□□ 0.02
P04942 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
P04942 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.2■□□□□ 0.02
P04942 Gm38205-201ENSMUST00000192243 258 ntBASIC15.2■□□□□ 0.02
P04942 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
P04942 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04942 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
P04942 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.19■□□□□ 0.02
P04942 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
P04942 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04942 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.19■□□□□ 0.02
P04942 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.18■□□□□ 0.02
P04942 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
P04942 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.18■□□□□ 0.02
P04942 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.18■□□□□ 0.02
P04942 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04942 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
P04942 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.17■□□□□ 0.02
P04942 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.17■□□□□ 0.02
P04942 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.17■□□□□ 0.02
P04942 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.17■□□□□ 0.02
P04942 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04942 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms