Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Krt1P04104 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
Krt1P04104 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Krt1P04104 Gm10420-201ENSMUST00000121713 882 ntBASIC17.91■□□□□ 0.46
Krt1P04104 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.91■□□□□ 0.46
Krt1P04104 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Krt1P04104 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Krt1P04104 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Krt1P04104 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.9■□□□□ 0.46
Krt1P04104 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Krt1P04104 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Krt1P04104 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Krt1P04104 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Krt1P04104 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt1P04104 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt1P04104 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt1P04104 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.89■□□□□ 0.45
Krt1P04104 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.89■□□□□ 0.45
Krt1P04104 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.89■□□□□ 0.45
Krt1P04104 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt1P04104 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Krt1P04104 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.89■□□□□ 0.45
Krt1P04104 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Krt1P04104 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.88■□□□□ 0.45
Krt1P04104 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Krt1P04104 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.88■□□□□ 0.45
Krt1P04104 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.88■□□□□ 0.45
Krt1P04104 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Krt1P04104 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.88■□□□□ 0.45
Krt1P04104 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.88■□□□□ 0.45
Krt1P04104 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Krt1P04104 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Krt1P04104 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.87■□□□□ 0.45
Krt1P04104 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.87■□□□□ 0.45
Krt1P04104 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Krt1P04104 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Krt1P04104 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Krt1P04104 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Krt1P04104 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Krt1P04104 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Krt1P04104 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.86■□□□□ 0.45
Krt1P04104 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Krt1P04104 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt1P04104 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.85■□□□□ 0.45
Krt1P04104 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt1P04104 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Krt1P04104 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms