Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CfdP03953 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CfdP03953 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.8■□□□□ 0.12
CfdP03953 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CfdP03953 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CfdP03953 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CfdP03953 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Gm5921-201ENSMUST00000075898 882 ntBASIC15.79■□□□□ 0.12
CfdP03953 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CfdP03953 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CfdP03953 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CfdP03953 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CfdP03953 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.78■□□□□ 0.12
CfdP03953 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CfdP03953 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CfdP03953 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CfdP03953 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CfdP03953 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CfdP03953 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CfdP03953 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CfdP03953 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CfdP03953 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CfdP03953 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CfdP03953 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CfdP03953 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CfdP03953 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CfdP03953 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
CfdP03953 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CfdP03953 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.76■□□□□ 0.11
CfdP03953 Serp2-204ENSMUST00000228055 705 ntBASIC15.76■□□□□ 0.11
CfdP03953 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.76■□□□□ 0.11
CfdP03953 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CfdP03953 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CfdP03953 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CfdP03953 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CfdP03953 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CfdP03953 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.75■□□□□ 0.11
CfdP03953 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CfdP03953 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CfdP03953 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CfdP03953 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CfdP03953 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CfdP03953 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CfdP03953 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CfdP03953 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CfdP03953 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CfdP03953 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CfdP03953 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CfdP03953 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CfdP03953 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.74■□□□□ 0.11
CfdP03953 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CfdP03953 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CfdP03953 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CfdP03953 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CfdP03953 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.73■□□□□ 0.11
CfdP03953 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CfdP03953 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CfdP03953 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CfdP03953 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CfdP03953 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Fst-202ENSMUST00000223640 2612 ntBASIC15.72■□□□□ 0.11
CfdP03953 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CfdP03953 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms