Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TcraP01849 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TcraP01849 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TcraP01849 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TcraP01849 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TcraP01849 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.78□□□□□ -0.2
TcraP01849 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TcraP01849 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TcraP01849 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TcraP01849 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TcraP01849 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TcraP01849 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TcraP01849 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TcraP01849 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
TcraP01849 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TcraP01849 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.77□□□□□ -0.21
TcraP01849 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TcraP01849 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TcraP01849 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TcraP01849 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TcraP01849 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TcraP01849 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TcraP01849 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TcraP01849 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TcraP01849 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TcraP01849 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TcraP01849 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TcraP01849 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.76□□□□□ -0.21
TcraP01849 Gm10232-201ENSMUST00000089221 720 ntBASIC13.76□□□□□ -0.21
TcraP01849 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TcraP01849 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TcraP01849 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.75□□□□□ -0.21
TcraP01849 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.75□□□□□ -0.21
TcraP01849 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.75□□□□□ -0.21
TcraP01849 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TcraP01849 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TcraP01849 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TcraP01849 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TcraP01849 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TcraP01849 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms