Protein–RNA interactions for Protein: P01680

Ig kappa chain V-IV region S107B, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01680 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
P01680 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.92■□□□□ 0.3
P01680 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.92■□□□□ 0.3
P01680 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.92■□□□□ 0.3
P01680 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01680 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.91■□□□□ 0.3
P01680 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01680 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01680 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
P01680 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01680 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01680 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.9■□□□□ 0.3
P01680 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.9■□□□□ 0.3
P01680 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
P01680 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
P01680 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.9■□□□□ 0.3
P01680 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.9■□□□□ 0.3
P01680 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P01680 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
P01680 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.89■□□□□ 0.29
P01680 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Gm5408-201ENSMUST00000197998 747 ntBASIC16.89■□□□□ 0.29
P01680 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
P01680 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.89■□□□□ 0.29
P01680 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.89■□□□□ 0.29
P01680 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01680 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P01680 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
P01680 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.88■□□□□ 0.29
P01680 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P01680 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P01680 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P01680 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.87■□□□□ 0.29
P01680 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.87■□□□□ 0.29
P01680 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.87■□□□□ 0.29
P01680 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.87■□□□□ 0.29
P01680 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.87■□□□□ 0.29
P01680 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01680 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.87■□□□□ 0.29
P01680 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
P01680 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.86■□□□□ 0.29
P01680 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
P01680 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Gm27011-201ENSMUST00000182352 972 ntBASIC16.86■□□□□ 0.29
P01680 Rab3c-203ENSMUST00000224180 967 ntBASIC16.86■□□□□ 0.29
P01680 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.86■□□□□ 0.29
P01680 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01680 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 883 ms