Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.24■□□□□ 0.51
Best1O88870 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Best1O88870 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Best1O88870 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Best1O88870 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.23■□□□□ 0.51
Best1O88870 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Best1O88870 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Best1O88870 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Gm26524-201ENSMUST00000192339 390 ntBASIC18.23■□□□□ 0.51
Best1O88870 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.23■□□□□ 0.51
Best1O88870 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Best1O88870 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.23■□□□□ 0.51
Best1O88870 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.23■□□□□ 0.51
Best1O88870 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Best1O88870 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Best1O88870 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.22■□□□□ 0.51
Best1O88870 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.22■□□□□ 0.51
Best1O88870 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Best1O88870 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.21■□□□□ 0.51
Best1O88870 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.21■□□□□ 0.51
Best1O88870 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.21■□□□□ 0.51
Best1O88870 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.21■□□□□ 0.51
Best1O88870 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Best1O88870 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Best1O88870 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.21■□□□□ 0.51
Best1O88870 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Best1O88870 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Best1O88870 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Best1O88870 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Best1O88870 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Best1O88870 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Rab3c-203ENSMUST00000224180 967 ntBASIC18.2■□□□□ 0.5
Best1O88870 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Best1O88870 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Best1O88870 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Best1O88870 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.2■□□□□ 0.5
Best1O88870 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Best1O88870 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Best1O88870 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Best1O88870 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Best1O88870 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Best1O88870 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.19■□□□□ 0.5
Best1O88870 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.19■□□□□ 0.5
Best1O88870 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Best1O88870 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Best1O88870 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Best1O88870 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Best1O88870 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Best1O88870 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.18■□□□□ 0.5
Best1O88870 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.18■□□□□ 0.5
Best1O88870 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.18■□□□□ 0.5
Best1O88870 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.18■□□□□ 0.5
Best1O88870 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Best1O88870 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms