Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn1O88551 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.12■□□□□ 0.17
Cldn1O88551 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.12■□□□□ 0.17
Cldn1O88551 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cldn1O88551 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Cldn1O88551 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.12■□□□□ 0.17
Cldn1O88551 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cldn1O88551 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.12■□□□□ 0.17
Cldn1O88551 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cldn1O88551 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.12■□□□□ 0.17
Cldn1O88551 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn1O88551 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn1O88551 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cldn1O88551 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn1O88551 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cldn1O88551 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cldn1O88551 Rab3c-203ENSMUST00000224180 967 ntBASIC16.11■□□□□ 0.17
Cldn1O88551 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn1O88551 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn1O88551 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Cldn1O88551 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn1O88551 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn1O88551 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cldn1O88551 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.1■□□□□ 0.17
Cldn1O88551 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldn1O88551 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cldn1O88551 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.1■□□□□ 0.17
Cldn1O88551 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldn1O88551 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cldn1O88551 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cldn1O88551 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn1O88551 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldn1O88551 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.1■□□□□ 0.17
Cldn1O88551 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cldn1O88551 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cldn1O88551 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.09■□□□□ 0.17
Cldn1O88551 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.09■□□□□ 0.17
Cldn1O88551 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.09■□□□□ 0.17
Cldn1O88551 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.09■□□□□ 0.17
Cldn1O88551 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.09■□□□□ 0.17
Cldn1O88551 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn1O88551 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cldn1O88551 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cldn1O88551 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Cldn1O88551 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cldn1O88551 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cldn1O88551 Gm12896-201ENSMUST00000118430 226 ntBASIC16.08■□□□□ 0.16
Cldn1O88551 Gm6576-201ENSMUST00000169678 883 ntBASIC16.08■□□□□ 0.16
Cldn1O88551 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cldn1O88551 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
Cldn1O88551 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.08■□□□□ 0.16
Cldn1O88551 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldn1O88551 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldn1O88551 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldn1O88551 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldn1O88551 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cldn1O88551 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cldn1O88551 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 252.8 ms