Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.15■□□□□ 0.34
Matn3O35701 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.15■□□□□ 0.34
Matn3O35701 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Matn3O35701 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Matn3O35701 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Matn3O35701 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn3O35701 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn3O35701 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn3O35701 Gm9959-201ENSMUST00000068277 390 ntBASIC17.14■□□□□ 0.33
Matn3O35701 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn3O35701 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Matn3O35701 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Matn3O35701 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Matn3O35701 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Matn3O35701 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn3O35701 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Matn3O35701 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Matn3O35701 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Matn3O35701 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn3O35701 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn3O35701 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Matn3O35701 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn3O35701 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn3O35701 Gm10232-201ENSMUST00000089221 720 ntBASIC17.13■□□□□ 0.33
Matn3O35701 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.13■□□□□ 0.33
Matn3O35701 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Matn3O35701 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn3O35701 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Matn3O35701 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.12■□□□□ 0.33
Matn3O35701 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Matn3O35701 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Matn3O35701 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Matn3O35701 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Matn3O35701 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Matn3O35701 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn3O35701 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Matn3O35701 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Matn3O35701 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn3O35701 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.11■□□□□ 0.33
Matn3O35701 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.11■□□□□ 0.33
Matn3O35701 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.11■□□□□ 0.33
Matn3O35701 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn3O35701 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.11■□□□□ 0.33
Matn3O35701 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn3O35701 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn3O35701 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.11■□□□□ 0.33
Matn3O35701 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.11■□□□□ 0.33
Matn3O35701 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Matn3O35701 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Matn3O35701 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Matn3O35701 Gm10399-202ENSMUST00000202768 748 ntBASIC17.1■□□□□ 0.33
Matn3O35701 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Matn3O35701 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Matn3O35701 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Matn3O35701 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Matn3O35701 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn3O35701 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn3O35701 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Matn3O35701 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Matn3O35701 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Matn3O35701 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Matn3O35701 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.08■□□□□ 0.33
Matn3O35701 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Matn3O35701 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Matn3O35701 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Matn3O35701 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn3O35701 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn3O35701 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.08■□□□□ 0.32
Matn3O35701 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn3O35701 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn3O35701 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn3O35701 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn3O35701 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn3O35701 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms