Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Abca4O35600 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abca4O35600 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abca4O35600 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.9■□□□□ 0.46
Abca4O35600 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.9■□□□□ 0.46
Abca4O35600 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abca4O35600 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abca4O35600 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Abca4O35600 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.9■□□□□ 0.46
Abca4O35600 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Abca4O35600 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.9■□□□□ 0.46
Abca4O35600 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abca4O35600 Gm43514-201ENSMUST00000198852 424 ntBASIC17.9■□□□□ 0.46
Abca4O35600 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Abca4O35600 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Abca4O35600 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abca4O35600 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abca4O35600 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Abca4O35600 Gm25016-201ENSMUST00000158399 131 ntBASIC17.89■□□□□ 0.46
Abca4O35600 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Abca4O35600 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Abca4O35600 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Abca4O35600 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Abca4O35600 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca4O35600 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Abca4O35600 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Abca4O35600 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca4O35600 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca4O35600 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abca4O35600 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Abca4O35600 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Abca4O35600 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca4O35600 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca4O35600 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Abca4O35600 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca4O35600 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abca4O35600 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Abca4O35600 Gm17661-201ENSMUST00000170317 270 ntBASIC17.88■□□□□ 0.45
Abca4O35600 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.88■□□□□ 0.45
Abca4O35600 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.87■□□□□ 0.45
Abca4O35600 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.87■□□□□ 0.45
Abca4O35600 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abca4O35600 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.86■□□□□ 0.45
Abca4O35600 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.86■□□□□ 0.45
Abca4O35600 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Abca4O35600 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.86■□□□□ 0.45
Abca4O35600 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Abca4O35600 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abca4O35600 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abca4O35600 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abca4O35600 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abca4O35600 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abca4O35600 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Abca4O35600 AA386476-201ENSMUST00000098781 1665 ntBASIC17.85■□□□□ 0.45
Abca4O35600 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Abca4O35600 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.84■□□□□ 0.45
Abca4O35600 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Abca4O35600 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Abca4O35600 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abca4O35600 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Abca4O35600 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Abca4O35600 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abca4O35600 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abca4O35600 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abca4O35600 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abca4O35600 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abca4O35600 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca4O35600 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.82■□□□□ 0.44
Abca4O35600 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Abca4O35600 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abca4O35600 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.82■□□□□ 0.44
Abca4O35600 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms