Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Atf6bO35451 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Atf6bO35451 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.34■□□□□ 0.21
Atf6bO35451 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Atf6bO35451 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atf6bO35451 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atf6bO35451 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atf6bO35451 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
Atf6bO35451 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atf6bO35451 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Atf6bO35451 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Atf6bO35451 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.33■□□□□ 0.2
Atf6bO35451 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6bO35451 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.33■□□□□ 0.2
Atf6bO35451 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6bO35451 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.33■□□□□ 0.2
Atf6bO35451 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6bO35451 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6bO35451 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atf6bO35451 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.32■□□□□ 0.2
Atf6bO35451 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Atf6bO35451 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6bO35451 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6bO35451 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6bO35451 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6bO35451 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.31■□□□□ 0.2
Atf6bO35451 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6bO35451 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6bO35451 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6bO35451 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.31■□□□□ 0.2
Atf6bO35451 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.31■□□□□ 0.2
Atf6bO35451 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.31■□□□□ 0.2
Atf6bO35451 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6bO35451 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.31■□□□□ 0.2
Atf6bO35451 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Atf6bO35451 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
Atf6bO35451 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.3■□□□□ 0.2
Atf6bO35451 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Atf6bO35451 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6bO35451 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6bO35451 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6bO35451 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.29■□□□□ 0.2
Atf6bO35451 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.29■□□□□ 0.2
Atf6bO35451 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6bO35451 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Atf6bO35451 Gm9988-201ENSMUST00000069786 435 ntBASIC16.29■□□□□ 0.2
Atf6bO35451 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Atf6bO35451 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6bO35451 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Atf6bO35451 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.28■□□□□ 0.2
Atf6bO35451 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6bO35451 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6bO35451 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6bO35451 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6bO35451 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6bO35451 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.27■□□□□ 0.2
Atf6bO35451 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6bO35451 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Atf6bO35451 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6bO35451 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atf6bO35451 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atf6bO35451 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atf6bO35451 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Atf6bO35451 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms