Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
E030018B13RikJ3QMS9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
E030018B13RikJ3QMS9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
E030018B13RikJ3QMS9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
E030018B13RikJ3QMS9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
E030018B13RikJ3QMS9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
E030018B13RikJ3QMS9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
E030018B13RikJ3QMS9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Nespas-201ENSMUST00000143738 1083 ntBASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Gm37179-201ENSMUST00000194862 823 ntBASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
E030018B13RikJ3QMS9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
E030018B13RikJ3QMS9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Gm7290-201ENSMUST00000104990 617 ntBASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Gm12918-201ENSMUST00000120234 636 ntBASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Gm15710-201ENSMUST00000121821 636 ntBASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Gm5075-201ENSMUST00000196916 622 ntBASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.27■□□□□ 0.04
E030018B13RikJ3QMS9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
E030018B13RikJ3QMS9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Gm12933-201ENSMUST00000120203 872 ntBASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.26■□□□□ 0.03
E030018B13RikJ3QMS9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 BC021767-201ENSMUST00000126387 1716 ntBASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
E030018B13RikJ3QMS9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E030018B13RikJ3QMS9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms