Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccdc149F6V035 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc149F6V035 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccdc149F6V035 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.19■□□□□ 0.66
Ccdc149F6V035 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Gm8520-201ENSMUST00000186517 868 ntBASIC19.18■□□□□ 0.66
Ccdc149F6V035 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.18■□□□□ 0.66
Ccdc149F6V035 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.18■□□□□ 0.66
Ccdc149F6V035 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc149F6V035 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc149F6V035 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc149F6V035 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc149F6V035 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Gm22240-201ENSMUST00000175225 82 ntBASIC19.15■□□□□ 0.66
Ccdc149F6V035 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc149F6V035 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc149F6V035 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc149F6V035 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.14■□□□□ 0.65
Ccdc149F6V035 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc149F6V035 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc149F6V035 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc149F6V035 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc149F6V035 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc149F6V035 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc149F6V035 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms