Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf4lE9Q2N0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf4lE9Q2N0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.02■□□□□ 0.16
Cpsf4lE9Q2N0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cpsf4lE9Q2N0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cpsf4lE9Q2N0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cpsf4lE9Q2N0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cpsf4lE9Q2N0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cpsf4lE9Q2N0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Gm8495-201ENSMUST00000188740 694 ntBASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Gm18671-201ENSMUST00000214826 683 ntBASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cpsf4lE9Q2N0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cpsf4lE9Q2N0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Gm13534-201ENSMUST00000121169 513 ntBASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Gm26571-201ENSMUST00000181399 666 ntBASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cpsf4lE9Q2N0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cpsf4lE9Q2N0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cpsf4lE9Q2N0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4lE9Q2N0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.96■□□□□ 0.14
Cpsf4lE9Q2N0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4lE9Q2N0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4lE9Q2N0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4lE9Q2N0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cpsf4lE9Q2N0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.95■□□□□ 0.14
Cpsf4lE9Q2N0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms