Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
Herc3A6H6S0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.93■□□□□ 0.94
Herc3A6H6S0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc3A6H6S0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Herc3A6H6S0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.91■□□□□ 0.94
Herc3A6H6S0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Herc3A6H6S0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Herc3A6H6S0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc3A6H6S0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Herc3A6H6S0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc3A6H6S0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.9■□□□□ 0.94
Herc3A6H6S0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc3A6H6S0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Herc3A6H6S0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc3A6H6S0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc3A6H6S0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Herc3A6H6S0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc3A6H6S0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc3A6H6S0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Herc3A6H6S0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc3A6H6S0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc3A6H6S0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Herc3A6H6S0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.89■□□□□ 0.94
Herc3A6H6S0 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.89■□□□□ 0.93
Herc3A6H6S0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.89■□□□□ 0.93
Herc3A6H6S0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.89■□□□□ 0.93
Herc3A6H6S0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Herc3A6H6S0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Herc3A6H6S0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc3A6H6S0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc3A6H6S0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.87■□□□□ 0.93
Herc3A6H6S0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Herc3A6H6S0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.87■□□□□ 0.93
Herc3A6H6S0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc3A6H6S0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc3A6H6S0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Herc3A6H6S0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc3A6H6S0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc3A6H6S0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herc3A6H6S0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Herc3A6H6S0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.86■□□□□ 0.93
Herc3A6H6S0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Herc3A6H6S0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herc3A6H6S0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herc3A6H6S0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herc3A6H6S0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.85■□□□□ 0.93
Herc3A6H6S0 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.85■□□□□ 0.93
Herc3A6H6S0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms