Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm3854A0A1B0GSS6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gm3854A0A1B0GSS6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm3854A0A1B0GSS6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3854A0A1B0GSS6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3854A0A1B0GSS6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3854A0A1B0GSS6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm5643-201ENSMUST00000117081 966 ntBASIC18.9■□□□□ 0.62
Gm3854A0A1B0GSS6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3854A0A1B0GSS6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm3854A0A1B0GSS6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm3854A0A1B0GSS6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3854A0A1B0GSS6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3854A0A1B0GSS6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.89■□□□□ 0.61
Gm3854A0A1B0GSS6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.89■□□□□ 0.61
Gm3854A0A1B0GSS6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3854A0A1B0GSS6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3854A0A1B0GSS6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm3854A0A1B0GSS6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Dio3-201ENSMUST00000097228 1449 ntBASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm3854A0A1B0GSS6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm3854A0A1B0GSS6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms