Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Igkv3-4A0A140T8Q4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Igkv3-4A0A140T8Q4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igkv3-4A0A140T8Q4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Gm6627-201ENSMUST00000218299 2386 ntBASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igkv3-4A0A140T8Q4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Igkv3-4A0A140T8Q4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv3-4A0A140T8Q4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms