Protein–RNA interactions for Protein: A0A140T8P2

Igkv6-20, Immunoglobulin kappa variable 6-20 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-20A0A140T8P2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv6-20A0A140T8P2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm10653-202ENSMUST00000139570 835 ntBASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv6-20A0A140T8P2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv6-20A0A140T8P2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv6-20A0A140T8P2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv6-20A0A140T8P2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Gm20760-201ENSMUST00000179197 648 ntBASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv6-20A0A140T8P2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv6-20A0A140T8P2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv6-20A0A140T8P2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms