Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.48□□□□□ -0.41
Igkv1-88A0A140T8N1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Igkv1-88A0A140T8N1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 AA386476-201ENSMUST00000098781 1665 ntBASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Igkv1-88A0A140T8N1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.46□□□□□ -0.42
Igkv1-88A0A140T8N1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Igkv1-88A0A140T8N1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Igkv1-88A0A140T8N1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Igkv1-88A0A140T8N1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igkv1-88A0A140T8N1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igkv1-88A0A140T8N1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms