Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11421-201ENSMUST00000122124 294 ntBASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7860-201ENSMUST00000121190 879 ntBASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43173-201ENSMUST00000202246 593 ntBASIC16.52■□□□□ 0.24
Trav15d-2-dv6d-2A0A0G2JGQ7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27801-201ENSMUST00000184174 223 ntBASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8493-201ENSMUST00000196881 489 ntBASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav15d-2-dv6d-2A0A0G2JGQ7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms