Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gm10232-201ENSMUST00000089221 720 ntBASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-4A0A0G2JG37 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-4A0A0G2JG37 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav9d-4A0A0G2JG37 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Grk6-206ENSMUST00000224995 2971 ntBASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-4A0A0G2JG37 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9d-4A0A0G2JG37 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms