Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 AC154266.1-201ENSMUST00000223190 503 ntBASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.96□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms