Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm42569-201ENSMUST00000200539 472 ntBASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.02□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv13-1A0A0B4J1P8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm26571-201ENSMUST00000181399 666 ntBASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm42778-201ENSMUST00000199644 553 ntBASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm18671-201ENSMUST00000214826 683 ntBASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Gm7291-201ENSMUST00000199147 382 ntBASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbv13-1A0A0B4J1P8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms