Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-3A0A0B4J1K1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-3A0A0B4J1K1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Gm10399-202ENSMUST00000202768 748 ntBASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav4-3A0A0B4J1K1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav4-3A0A0B4J1K1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Gm7332-201ENSMUST00000118351 454 ntBASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav4-3A0A0B4J1K1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms