Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.2□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Gm6821-201ENSMUST00000107540 542 ntBASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.18□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tcrg-V4A0A0B4J1J8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms