Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gm26524-201ENSMUST00000192339 390 ntBASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv5-43A0A0B4J1J2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.39■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Igkv5-43A0A0B4J1J2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm12441-201ENSMUST00000121806 588 ntBASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.35■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.35■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.35■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.35■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.33■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv5-43A0A0B4J1J2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.33■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms