Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv3A0A0A6YYE2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv3A0A0A6YYE2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv3A0A0A6YYE2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Etf1-202ENSMUST00000180351 108 ntBASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm9870-201ENSMUST00000063874 645 ntBASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trbv3A0A0A6YYE2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv3A0A0A6YYE2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv3A0A0A6YYE2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.54□□□□□ -0.08
Trbv3A0A0A6YYE2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv3A0A0A6YYE2 Gm11175-201ENSMUST00000116172 543 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms