Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.51□□□□□ -0.09
Trav21-dv12A0A075B6C4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav21-dv12A0A075B6C4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav21-dv12A0A075B6C4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gm12821-201ENSMUST00000120022 600 ntBASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gm8493-201ENSMUST00000196881 489 ntBASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav21-dv12A0A075B6C4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gm11421-201ENSMUST00000122124 294 ntBASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav21-dv12A0A075B6C4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav21-dv12A0A075B6C4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms