Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-3A0A075B6A4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-3A0A075B6A4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Gm16437-201ENSMUST00000025669 507 ntBASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-3A0A075B6A4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Gm9806-201ENSMUST00000051080 552 ntBASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-3A0A075B6A4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-3A0A075B6A4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Scarna2-201ENSMUST00000157560 414 ntBASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-3A0A075B6A4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trav12d-3A0A075B6A4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav12d-3A0A075B6A4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trav12d-3A0A075B6A4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-3A0A075B6A4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12d-3A0A075B6A4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms