Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-1A0A075B644 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-1A0A075B644 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav13-1A0A075B644 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13-1A0A075B644 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Gm37179-201ENSMUST00000194862 823 ntBASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Trav13-1A0A075B644 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-1A0A075B644 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms