Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Cap2-205ENSMUST00000225824 1634 ntBASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16nA0A075B634 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.29□□□□□ -0.12
Trav16nA0A075B634 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16nA0A075B634 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.28□□□□□ -0.12
Trav16nA0A075B634 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav16nA0A075B634 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav16nA0A075B634 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav16nA0A075B634 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav16nA0A075B634 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.27□□□□□ -0.12
Trav16nA0A075B634 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav16nA0A075B634 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav16nA0A075B634 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav16nA0A075B634 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.27□□□□□ -0.12
Trav16nA0A075B634 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16nA0A075B634 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16nA0A075B634 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16nA0A075B634 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms