Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-53A0A075B5W3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-53A0A075B5W3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ighv1-53A0A075B5W3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-53A0A075B5W3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-53A0A075B5W3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.21□□□□□ -0.13
Ighv1-53A0A075B5W3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-53A0A075B5W3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-53A0A075B5W3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ighv1-53A0A075B5W3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-53A0A075B5W3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-53A0A075B5W3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-53A0A075B5W3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-53A0A075B5W3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-53A0A075B5W3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-53A0A075B5W3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-53A0A075B5W3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-53A0A075B5W3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms