Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.49□□□□□ -0.09
PdfS4R2K0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PdfS4R2K0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.49□□□□□ -0.09
PdfS4R2K0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.49□□□□□ -0.09
PdfS4R2K0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.49□□□□□ -0.09
PdfS4R2K0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.49□□□□□ -0.09
PdfS4R2K0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PdfS4R2K0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Gm22238-201ENSMUST00000175222 88 ntBASIC14.48□□□□□ -0.09
PdfS4R2K0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PdfS4R2K0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PdfS4R2K0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.47□□□□□ -0.09
PdfS4R2K0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
PdfS4R2K0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PdfS4R2K0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PdfS4R2K0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PdfS4R2K0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PdfS4R2K0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdfS4R2K0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdfS4R2K0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PdfS4R2K0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdfS4R2K0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdfS4R2K0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PdfS4R2K0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
PdfS4R2K0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PdfS4R2K0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PdfS4R2K0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PdfS4R2K0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdfS4R2K0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdfS4R2K0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdfS4R2K0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PdfS4R2K0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdfS4R2K0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
PdfS4R2K0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdfS4R2K0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PdfS4R2K0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.45□□□□□ -0.1
PdfS4R2K0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdfS4R2K0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms