Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb2S4R1M3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb2S4R1M3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb2S4R1M3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb2S4R1M3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.92■□□□□ 0.62
H2afb2S4R1M3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.91■□□□□ 0.62
H2afb2S4R1M3 BC021767-201ENSMUST00000126387 1716 ntBASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb2S4R1M3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb2S4R1M3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms