Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 Gm27801-201ENSMUST00000184174 223 ntBASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mrpl40Q9Z2Q5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mrpl40Q9Z2Q5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mrpl40Q9Z2Q5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Gm13234-201ENSMUST00000120010 747 ntBASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mrpl40Q9Z2Q5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mrpl40Q9Z2Q5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Mrpl40Q9Z2Q5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Mrpl40Q9Z2Q5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mrpl40Q9Z2Q5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mrpl40Q9Z2Q5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mrpl40Q9Z2Q5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.83■□□□□ 0.6
Mrpl40Q9Z2Q5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mrpl40Q9Z2Q5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.83■□□□□ 0.6
Mrpl40Q9Z2Q5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mrpl40Q9Z2Q5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mrpl40Q9Z2Q5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mrpl40Q9Z2Q5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mrpl40Q9Z2Q5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.82■□□□□ 0.6
Mrpl40Q9Z2Q5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mrpl40Q9Z2Q5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mrpl40Q9Z2Q5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms