Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tubd1Q9R1K7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tubd1Q9R1K7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tubd1Q9R1K7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tubd1Q9R1K7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Gm42778-201ENSMUST00000199644 553 ntBASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tubd1Q9R1K7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Gm10849-201ENSMUST00000100397 618 ntBASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Gm42642-201ENSMUST00000200683 355 ntBASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubd1Q9R1K7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Gm8495-201ENSMUST00000188740 694 ntBASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubd1Q9R1K7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubd1Q9R1K7 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.33■□□□□ 0.69
Tubd1Q9R1K7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.33■□□□□ 0.69
Tubd1Q9R1K7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubd1Q9R1K7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
Tubd1Q9R1K7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.33■□□□□ 0.68
Tubd1Q9R1K7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Tubd1Q9R1K7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tubd1Q9R1K7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubd1Q9R1K7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Tubd1Q9R1K7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms