Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.49■□□□□ 0.71
Rfwd2Q9R1A8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfwd2Q9R1A8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfwd2Q9R1A8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Gm9847-201ENSMUST00000052528 599 ntBASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfwd2Q9R1A8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 AA386476-201ENSMUST00000098781 1665 ntBASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfwd2Q9R1A8 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rfwd2Q9R1A8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfwd2Q9R1A8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfwd2Q9R1A8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms