Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Gm6139-201ENSMUST00000079261 882 ntBASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RpgrQ9R0X5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RpgrQ9R0X5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RpgrQ9R0X5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RpgrQ9R0X5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RpgrQ9R0X5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.14■□□□□ 0.66
RpgrQ9R0X5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.14■□□□□ 0.66
RpgrQ9R0X5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RpgrQ9R0X5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RpgrQ9R0X5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Gm12251-201ENSMUST00000117893 792 ntBASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Gm43173-201ENSMUST00000202246 593 ntBASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RpgrQ9R0X5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RpgrQ9R0X5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms