Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.38■□□□□ 0.69
Col4a4Q9QZR9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a4Q9QZR9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a4Q9QZR9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a4Q9QZR9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a4Q9QZR9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.38■□□□□ 0.69
Col4a4Q9QZR9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Gm11539-201ENSMUST00000119837 557 ntBASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Gm13436-201ENSMUST00000120418 567 ntBASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Gm3375-201ENSMUST00000203929 796 ntBASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a4Q9QZR9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a4Q9QZR9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a4Q9QZR9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Gm13559-201ENSMUST00000120476 863 ntBASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a4Q9QZR9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.33■□□□□ 0.69
Col4a4Q9QZR9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a4Q9QZR9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.33■□□□□ 0.69
Col4a4Q9QZR9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a4Q9QZR9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a4Q9QZR9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a4Q9QZR9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a4Q9QZR9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a4Q9QZR9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.33■□□□□ 0.68
Col4a4Q9QZR9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.33■□□□□ 0.68
Col4a4Q9QZR9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a4Q9QZR9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a4Q9QZR9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a4Q9QZR9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col4a4Q9QZR9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a4Q9QZR9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a4Q9QZR9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Col4a4Q9QZR9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a4Q9QZR9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a4Q9QZR9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a4Q9QZR9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col4a4Q9QZR9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.31■□□□□ 0.68
Col4a4Q9QZR9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a4Q9QZR9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a4Q9QZR9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col4a4Q9QZR9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a4Q9QZR9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.3■□□□□ 0.68
Col4a4Q9QZR9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a4Q9QZR9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col4a4Q9QZR9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a4Q9QZR9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a4Q9QZR9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a4Q9QZR9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a4Q9QZR9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a4Q9QZR9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a4Q9QZR9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a4Q9QZR9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a4Q9QZR9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.29■□□□□ 0.68
Col4a4Q9QZR9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a4Q9QZR9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Col4a4Q9QZR9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Col4a4Q9QZR9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.28■□□□□ 0.68
Col4a4Q9QZR9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.28■□□□□ 0.68
Col4a4Q9QZR9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col4a4Q9QZR9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms