Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Phtf1Q9QZ09 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Phtf1Q9QZ09 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Gm7514-201ENSMUST00000209475 934 ntBASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Phtf1Q9QZ09 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Phtf1Q9QZ09 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Phtf1Q9QZ09 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Phtf1Q9QZ09 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Phtf1Q9QZ09 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Gm37179-201ENSMUST00000194862 823 ntBASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.83■□□□□ 0.93
Phtf1Q9QZ09 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Phtf1Q9QZ09 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Phtf1Q9QZ09 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Phtf1Q9QZ09 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 Gm6420-201ENSMUST00000193885 723 ntBASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Phtf1Q9QZ09 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Phtf1Q9QZ09 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms