Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crlf1Q9JM58 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Crlf1Q9JM58 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Crlf1Q9JM58 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crlf1Q9JM58 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crlf1Q9JM58 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crlf1Q9JM58 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crlf1Q9JM58 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Gm27741-201ENSMUST00000185060 237 ntBASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crlf1Q9JM58 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crlf1Q9JM58 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.23■□□□□ 0.03
Crlf1Q9JM58 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crlf1Q9JM58 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Crlf1Q9JM58 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Crlf1Q9JM58 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms