Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sec61a2Q9JLR1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sec61a2Q9JLR1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.02■□□□□ 0.32
Sec61a2Q9JLR1 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.02■□□□□ 0.32
Sec61a2Q9JLR1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sec61a2Q9JLR1 Gm40848-201ENSMUST00000221998 324 ntBASIC17.02■□□□□ 0.32
Sec61a2Q9JLR1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a2Q9JLR1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a2Q9JLR1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a2Q9JLR1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a2Q9JLR1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a2Q9JLR1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sec61a2Q9JLR1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sec61a2Q9JLR1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Smad6-203ENSMUST00000179458 273 ntBASIC17■□□□□ 0.31
Sec61a2Q9JLR1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sec61a2Q9JLR1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Gm26833-201ENSMUST00000180899 440 ntBASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sec61a2Q9JLR1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sec61a2Q9JLR1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sec61a2Q9JLR1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Gm11421-201ENSMUST00000122124 294 ntBASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sec61a2Q9JLR1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sec61a2Q9JLR1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms