Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Gm6420-201ENSMUST00000193885 723 ntBASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rfx5Q9JL61 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Gm37179-201ENSMUST00000194862 823 ntBASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.09■□□□□ 0.81
Rfx5Q9JL61 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx5Q9JL61 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx5Q9JL61 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx5Q9JL61 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx5Q9JL61 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rfx5Q9JL61 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.08■□□□□ 0.81
Rfx5Q9JL61 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx5Q9JL61 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx5Q9JL61 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx5Q9JL61 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx5Q9JL61 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx5Q9JL61 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Nespas-201ENSMUST00000143738 1083 ntBASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rfx5Q9JL61 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx5Q9JL61 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx5Q9JL61 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms