Protein–RNA interactions for Protein: Q9JHL1

Slc9a3r2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r2Q9JHL1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc9a3r2Q9JHL1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc9a3r2Q9JHL1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc9a3r2Q9JHL1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc9a3r2Q9JHL1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc9a3r2Q9JHL1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Slc9a3r2Q9JHL1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Slc9a3r2Q9JHL1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc9a3r2Q9JHL1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Gm8495-201ENSMUST00000188740 694 ntBASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc9a3r2Q9JHL1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Slc9a3r2Q9JHL1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms