Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a3Q9D554 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Sf3a3Q9D554 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a3Q9D554 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a3Q9D554 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Gm12366-201ENSMUST00000121722 873 ntBASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Gm5786-201ENSMUST00000085368 882 ntBASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a3Q9D554 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a3Q9D554 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sf3a3Q9D554 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sf3a3Q9D554 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a3Q9D554 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a3Q9D554 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a3Q9D554 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a3Q9D554 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a3Q9D554 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a3Q9D554 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a3Q9D554 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a3Q9D554 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a3Q9D554 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a3Q9D554 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms