Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mrpl55Q9CZ83 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Grk6-206ENSMUST00000224995 2971 ntBASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mrpl55Q9CZ83 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.43□□□□□ -0.42
Mrpl55Q9CZ83 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Mrpl55Q9CZ83 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.41□□□□□ -0.42
Mrpl55Q9CZ83 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.4□□□□□ -0.42
Mrpl55Q9CZ83 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mrpl55Q9CZ83 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Mrpl55Q9CZ83 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms